vendredi 13 mars 2015

Female trout prefer long lost cousins



When people reflect upon biodiversity, they often imagine that biodiversity can be quantified by counting the number of species in a given area or ecosystem. It is of course an efficient way to estimate at what speed we impact biodiversity through human activities. The alchemy of biodiversity however demands to step beyond the concept of species, on the one hand because the concept of species itself is somewhat porous and fuzzy, and on the other hand because the dynamics of diversity are highly dependent on what happens also within species.

Brown trout is a flagship of the importance of intraspecific diversity: in its distribution area, this species presents in fact at least 5 distinct genetic lineages, that have probably evolved in separate geographic entities for several hundreds of thousands of years [1]. The Atlantic lineage on the Atlantic ark, the Danubian lineage in the Danube basin, and in the southernmost region, the Mediterranean, Adriatic, and Marmorata lineages. While adaptation could have played a potential role in the divergence of these gene pools [2], we do not have evidence until now that each lineage is particularly adapted to its environment. But still, the genetic variation between these lineages is a wonder, and it is slowly gathering the attention of fish population managers.

But as the story goes, human activities have quickly turned the tables, and these lineages are not isolated from each other anymore. In particular, the Mediterranean area has undergone heavy stocking management practices for more than a century. We here refer to tenths of millions of individuals released in the Mediterranean area, all of them originating from the Atlantic lineage. The outcome of these intensive stocking practices is relatively heterogeneous, but we mainly observe the creation of large hydrid zones, with often the extirpation of the pure Mediterranean breed [3]. Genetic studies however question the level of reproductive isolation between these two lineages, sometimes showing that some reproductive barriers could be at work in natural rivers. 

Field work


Well, one way to investigate this question is to look directly at the reproduction in natura. That is what Jordi Gil did during his PhD, among other things. Basically, he went and observed reproductive behaviour in the populations of brown trout in Haute-Savoie, french northern Alps. Using cameras, he was able to record hundreds of hours of behavioural sequences in freezing conditions. 

 


Figure 1: To observe reproductive behaviour, we use a system that includes sub-aquatic analogic cameras (robust stuff), a recorder and some battery, everything packed up in a little waterproof box. Such system has to be efficient in harsh environments like here in Haute Savoie during winter. A lot of behavioural items can be sampled that way, such as female digging activity, mating, and it also allows to ascertain fish's phenotypes (Pictures from Jordi Gil).


But of course, this is not really helpful if you do not know to which lineage belong the fish you are observing. It turns out that the two lineages have very different phenotypes [4], and using these phenotypic indicators, it is possible to score individuals, in order to ascertain their lineage, or even to detect if they are hybrids, and if they are closer from one lineage for instance (see Figure 2 below). 






Figure 2: typical robes of an Atlantic trout (above) and a Mediterranean trout (below). The ATL lineage is characterized by the presence of a visible lateral line, as well as aureoles around large black spots. The MED lineage lacks this visible lateral line, presents a large number of small spots, especially on the opercular area, and also shows vertical stripes (Pictures from Jordi Gil).


Analysis


Jordi then investigated how females reacted to each male presence around the nest [5]. They could be more or less friendly, by trying to escape the male (and therefore leaving the nest), or on the contrary by staying on the nest, and even displaying intense maternal care activity in the presence of some males.
Basically, the questions were:
- Do females select males at random conditional on male's robe ?
- If they express any preference, does this preference depend on the female origin/lineage ?
 


What Jordi found is at the same time unsurprising and interesting. Females do express a preference for males robe, a thing that was not known before in natural populations of brown trout. But this preference is not expressed toward a precise robe, it is conditional on the difference of robe between the male, and the female herself: females tend to prefer males that present a robe different from their own (See some predictions in Figure 3).


Figure 3 : a glimpse at female preference. Here, the female preference is expressed between 0 and 1, 1 meaning that the female will be friendly, and show digging activity when a male arrives on the nest. This preference is plotted against the dissimilarity of phenotype between the female and the male. The predictions from the model were made for various conditions of operational sex ratio (OSR, how many males compete for a female) and body size ratio (ratio of male size on female size). The result is pretty clear in any conditions: female prefer dissimilar robes. 



And because robe differs between lineages, this heterogamous female preference will favour gene flow between the two lineages when they are placed in sympatry, a situation commonly provoked by the stocking practices. Brown trout reproductive behaviour is therefore a catalyst of introgression and will aggravate intra-specific diversity loss during secondary contacts, if maximal diversity is viewed as the maintenance of separate genetic lineages.
From a theoretical point of view however, this is more surprising. The two lineages have evolved separately over hundreds of thousands of years, and yet, no reproductive barrier regarding intersexual preference seems to have evolved, quite the contrary. It is often expected that inter-sexual preference should be directed at traits of adaptive significance, and one would expect that adaptive traits may have evolved over ages, thereby implying a divergent evolution of intersexual preference. 
Well, too bad, we will have to come up with new and alternative explanations!


References:


[1] Bernatchez, L. 2001. The evolutionary history of brown trout Salmo trutta L. inferred from phylogeographic, nested clade, and mismatch analyses of mitochondrial DNA variation. Evolution 55: 351–379.

[2] Fraser, D.J., Weir, L.K., Bernatchez, L., Hansen, M.M. &/ Taylor, E.B. 2011. Extent and scale of local adaptation in salmonid fishes: review and meta-analysis. Heredity 106: 404–420.

[3] Largiad er, C.R. & Scholl, A. 1996. Genetic introgression between native and introduced brown trout Salmo trutta L. populations in the Rhone River Basin. Molecular Ecology 5: 417–426.

[4] Aparicio, E., Garc ıa-Berthou, E., Araguas, R.M., Mart ınez, P. & Garcia Marin, J.L. 2005. Body pigmentation pattern to assess introgression by hatchery stocks in native Salmo trutta from Mediterranean streams. Journal of Fish Biology 67: 931–949.

[5] Gil, J., Caudron, A., & Labonne, J. 2015. Can female preference drive intraspecific diversity dynamics in brown trout (Salmo trutta, L.)? Ecology of Freshwater Fish. DOI: 10.1111/eff.12215





vendredi 26 septembre 2014

Back is black

The darker the better ?


A common way to communicate in animals, actively or passively, is to use visual cues. Such cues can provide information on your energetic status, your motivation, your origin. Some pigments are widely used in many animal species, such as melanin. Melanin is a trait characterized by an important heritability, and it has been shown to co-vary with many traits of importance for evolutionary ecologists: stress, dominance, immunity or reproductive investment.
This might be so because of at least two non-mutually exclusive reasons: first, the genes that code for melanin production can be pleiotropic, therefore also controlling for other traits. Second, the genes that code for melanin are associated with genes that code for other adaptive traits, due to a possible genetic correlation shaped by natural - or sexual - selection : if melanin production is a honest signal for adaptive traits, then it may have been picked up by the other sex as a cue for selecting the best mate, therefore creating a correlation in the association of alleles between the melanin genes and other genes coding for adaptive traits.
Because melanin has an apparent strong genetic basis in many species, and because we can determinate melanin level relatively easily without killing individuals, it has become really popular among evolutionary biologists, and several publications have reported correlations between melanin production and traits of interest for fitness [1].

Vincent Roussille worked in our lab during his Master degree, in collaboration with Lisa Jacquin. Together, they investigated the matter of melanin production and correlations with other traits. To do so, they wandered along two different avenues, the first of which we will browse today. They decided to benefit from an already completed experiment in sexual selection led by Marine Freychet in 2010, a former student in our lab. Simply put, Marine had placed brown trout spawners in a semi-artificial experimental channel, and observed reproductive behaviour (more to come on this soon !). Vincent and Lisa used pictures taken before and after the reproductive period, they assessed the level of melanin for each individual, male or female, and they also used several traits or data produced such as : stress (as measured by opercular movements frequency), reproductive investment (variation in weight) or reproductive success (number of offspring produced). 

As a side note, measuring darkness (a proxy for melanin) on trout body is not an easy task, First, our pictures were not top of the notch. Second, a fish is most of the time a 3D object, so working on pictures requires some concessions. Third, what is black ? Or what is dark ?


If you want some advices - or warnings -, contact Vincent Roussille, he spent some nights dreaming about it.


 First question : Is melanin coloration stable in time ?





The above graph indicate that the total area covered by melanin on each fish did not really change before and after reproduction: the trait appears to be stable, as it is expected if the genetic basis is strong. Plasticity seems to occur, though. 


Second question: Is melanin coloration correlated with stress ?


Vincent did not find any statistically significant relationship between opercular movements frequency and melanin coloration. It does not fully excludes a possible link, since stress is usually better approached by hormonal concentration measures for instance. Other studies did in fact find some correlations [2].


Third question : Is a greater melanin coloration associated with a greater reproductive investment ?




Here, Vincent found that the darker the robe, the more important the loss of body mass during reproduction, but for males only. This sexual difference rings a bell, because other authors have found that melanin based coloration could be related to aggressive behaviour, a trait that is of major importance in intra-sexual competition in salmonids.This is cool because Vincent also found that males generally presented a more intense melanin coloration than females.


Fourth and last question : if darker males are not stressed, and invest more, do they sire more ?


Hey guys, this is ecology and evolution, and rarely do things go where you expect them to ! So no, we did not find a correlation between robe darkness and reproductive success in males (and neither did we find it in females).
This seems contradictory with published studies, that show that darker males produce offspring with higher survival for instance [3,4] or that they are more competitive to access females through intra-sexual competition. But it only seems contradictory : it takes two to tango, and up to now, nobody said brown trout females were preferring darker males, in which case their superior competitive ability and the good genes they are supposedly carrying may only compensate their lack of attractivity for females.
But hey, that is just a hunch, and we did not yet test it.


I earlier said that Vincent and Lisa were investigating two avenues. The second is a protocol performed directly in natural populations, so we expect new exciting results soon from them ! Meanwhile, Vincent's report can be downloaded here.



References


[1] Jacquin, L., Récapet, C., Bouche, P., Leboucher, G. & Gasparini, J. 2012. Melanin-based coloration reflects alternative strategies to cope  with food limitation in pigeons.  Behavioral Ecology, 23, 907-915.

[2] Kittilsen, S., Schjolden, J., Beitnes-Johansen, I., Shaw, J. C., Pottinger, T. G., Sørensen, C., Braastad, B. O., Bakken, M. & Øverli, Ø. 2009. Melanin-based skin spots reflect stress responsiveness in salmonid fish. Hormones and Behavior, 56, 292-298.

[3] Marie-Orleach, L., Roussel, J. M., Bugeon, J., Tremblay, J., Ombredane, D. & Evanno, G. 2014. Melanin-based coloration of sneaker male Atlantic salmon is linked to viability and emergence timing of their offspring. Biological Journal of the Linnean Society, 111, 126-135.

[4] Wedekind, C., Jacob, A., Evanno, G., Nusslé, S. & Müller, R.  2008. Viability of brown trout embryos positively linked to melanin-based but negatively to carotenoid-based colours of their fathers. Proceedings of the Royal Society B: Biological Sciences, 275, 1737-1744.